UTP15

Protein-coding gene in the species Homo sapiens
UTP15
Identifiers
AliasesUTP15, NET21, small subunit processome component, UTP15 small subunit processome component
External IDsOMIM: 616194; MGI: 2145443; HomoloGene: 6629; GeneCards: UTP15; OMA:UTP15 - orthologs
Gene location (Human)
Chromosome 5 (human)
Chr.Chromosome 5 (human)[1]
Chromosome 5 (human)
Genomic location for UTP15
Genomic location for UTP15
Band5q13.2Start73,565,443 bp[1]
End73,583,380 bp[1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)[2]
Chromosome 13 (mouse)
Genomic location for UTP15
Genomic location for UTP15
Band13|13 D1Start98,383,353 bp[2]
End98,399,549 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • pancreatic epithelial cell

  • gonad

  • testicle

  • skin of abdomen

  • skin of leg

  • islet of Langerhans

  • rectum

  • monocyte

  • smooth muscle tissue
Top expressed in
  • hand

  • superior cervical ganglion

  • maxillary prominence

  • cumulus cell

  • mandibular prominence

  • otolith organ

  • utricle

  • primitive streak

  • epiblast

  • condyle
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
  • protein binding
  • RNA binding
Cellular component
  • cytoplasm
  • fibrillar center
  • nucleolus
  • nucleoplasm
  • nucleus
  • endoplasmic reticulum
Biological process
  • rRNA processing
  • positive regulation of transcription by RNA polymerase I
  • positive regulation of rRNA processing
  • transcription, DNA-templated
  • regulation of transcription, DNA-templated
  • ribosome biogenesis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

84135

105372

Ensembl

ENSG00000164338

ENSMUSG00000041747

UniProt

Q8TED0

Q8C7V3

RefSeq (mRNA)

NM_001284430
NM_001284431
NM_032175

NM_178918

RefSeq (protein)

NP_001271359
NP_001271360
NP_115551

NP_849249

Location (UCSC)Chr 5: 73.57 – 73.58 MbChr 13: 98.38 – 98.4 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

U3 small nucleolar RNA-associated protein 15 homolog is a protein that in humans is encoded by the UTP15 gene.[5][6]


See also

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000164338 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000041747 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA (Dec 2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc Natl Acad Sci U S A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  6. ^ "Entrez Gene: UTP15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)".

Further reading

  • Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  • Simpson JC, Wellenreuther R, Poustka A, et al. (2001). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Rep. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.
  • Scherl A, Couté Y, Déon C, et al. (2003). "Functional proteomic analysis of human nucleolus". Mol. Biol. Cell. 13 (11): 4100–9. doi:10.1091/mbc.E02-05-0271. PMC 133617. PMID 12429849.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.


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